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1

A Universal Definition of Life: Autonomy and Open-Ended Evolution

Kepa Ruiz-Mirazo, Juli Peretó, Alvaro Moreno

Journal:

Origins of Life and Evolution of Biospheres

Year:

2004

Language:

english

File:

PDF, 148 KB

english, 2004

2

Prebiotic Systems Chemistry: New Perspectives for the Origins of Life

Ruiz-Mirazo, Kepa, Briones, Carlos, de la Escosura, Andrés

Journal:

Chemical Reviews

Year:

2014

Language:

english

File:

PDF, 32.62 MB

english, 2014

3

Biological regulation: controlling the system from within

Bich, Leonardo, Mossio, Matteo, Ruiz-Mirazo, Kepa, Moreno, Alvaro

Journal:

Biology & Philosophy

Year:

2016

Language:

english

File:

PDF, 1.06 MB

english, 2016

4

Basic Autonomy as a Fundamental Step in the Synthesis of Life

Ruiz-Mirazo, Kepa, Moreno, Alvaro

Journal:

Artificial Life

Year:

2004

Language:

english

File:

PDF, 195 KB

english, 2004

5

Autonomy in evolution: from minimal to complex life

Kepa Ruiz-Mirazo, Alvaro Moreno

Journal:

Year:

2012

Language:

english

File:

PDF, 359 KB

english, 2012

6

The systems perspective at the crossroads between chemistry and biology

de la Escosura, Andrés, Briones, Carlos, Ruiz-Mirazo, Kepa

Journal:

Journal of Theoretical Biology

Year:

2015

Language:

english

File:

PDF, 1.48 MB

english, 2015

7

On the Origins of Information and Its Relevance for Biological Complexity

Ruiz-Mirazo, Kepa, Moreno, Alvaro

Journal:

Biological Theory

Year:

2006

Language:

english

File:

PDF, 70 KB

english, 2006

8

Organizational requirements for multicellular autonomy: insights from a comparative case study

Arnellos, Argyris, Moreno, Alvaro, Ruiz-Mirazo, Kepa

Journal:

Biology & Philosophy

Year:

2014

Language:

english

File:

PDF, 594 KB

english, 2014

9

Metabolism and the problem of its universalization

Alvaro Moreno Bergareche, Kepa Ruiz-Mirazo

Journal:

Year:

1999

Language:

english

File:

PDF, 125 KB

english, 1999

10

Defining Life or Bringing Biology to Life

Kepa Ruiz-Mirazo, Juli Peretó, Alvaro Moreno

Journal:

Origins of Life and Evolution of Biospheres

Year:

2010

Language:

english

File:

PDF, 153 KB

english, 2010

11

The problem of the emergence of functional diversity in prebiotic evolution

Alvaro Moreno, Kepa Ruiz-Mirazo

Journal:

Biology & Philosophy

Year:

2009

Language:

english

File:

PDF, 288 KB

english, 2009

12

PHILOSOPHICAL PROBLEMS ABOUT LIFE || Autonomy in evolution: from minimal to complex life

Kepa Ruiz-Mirazo and Alvaro Moreno

Journal:

Year:

2012

Language:

english

File:

PDF, 3.20 MB

english, 2012

13

Definitions of life as epistemic tools that reflect and foster the advance of biological knowledge

Amilburu, Alba, Moreno, Ãlvaro, Ruiz-Mirazo, Kepa

Journal:

Year:

2020

File:

PDF, 613 KB

2020

14

Impact of targeted sheep grazing on herbage and holm oak saplings in a silvopastoral wildfire prevention system in south-eastern Spain

Ruiz-Mirazo, Jabier, Robles, Ana Belén

Journal:

Agroforestry Systems

Year:

2012

Language:

english

File:

PDF, 465 KB

english, 2012

15

Soft and dispersed interface-rich aqueous systems that promote and guide chemical reactions

Serrano-Luginbühl, Sandra, Ruiz-Mirazo, Kepa, Ostaszewski, Ryszard, Gallou, Fabrice, Walde, Peter

Journal:

Nature Reviews Chemistry

Year:

2018

Language:

english

File:

PDF, 2.99 MB

english, 2018

16

On the way towards ‘basic autonomous agents’: Stochastic simulations of minimal lipid–peptide cells

Kepa Ruiz-Mirazo, Fabio Mavelli

Journal:

Year:

2008

Language:

english

File:

PDF, 1.01 MB

english, 2008

17

ENVIRONMENT: a computational platform to stochastically simulate reacting and self-reproducing lipid compartments

Mavelli, Fabio, Ruiz-Mirazo, Kepa

Journal:

Physical Biology

Year:

2010

Language:

english

File:

PDF, 711 KB

english, 2010

18

Boundary versus enabling conditions for the origins of life

Ruiz-Mirazo, Kepa

Journal:

Physics of Life Reviews

Year:

2020

File:

PDF, 218 KB

2020

19

Characterization and typification of small ruminant farms providing fuelbreak grazing services for wildfire prevention in Andalusia (Spain)

Mena, Y., Ruiz-Mirazo, J., Ruiz, F.A., Castel, J.M.

Journal:

Science of The Total Environment

Year:

2016

Language:

english

File:

PDF, 752 KB

english, 2016

20

In Search for Conceptual Bridges: A Review of “Functions in Biological and Artificial Worlds” Functions in Biological and Artificial Worlds. Comparative Philosophical Perspectives . U. Krohs and P. Kroes (Eds.). Vienna Series in Theoretical Biology. (2009, MIT Press.) 302 pages.

Saborido, Cristian, Mossio, Matteo, Ruiz-Mirazo, Kepa

Journal:

Artificial Life

Year:

2010

Language:

english

File:

PDF, 70 KB

english, 2010

21

Question 8: Bridging the Gap Between In Silico and In Vitro Approaches to Minimal Cells

Fabio Mavelli, Kepa Ruiz-Mirazo

Journal:

Origins of Life and Evolution of Biospheres

Year:

2007

Language:

english

File:

PDF, 176 KB

english, 2007

22

Do psychiatric medications, especially antidepressants, adversely impact maternal metabolic outcomes?

Lopez-Yarto, Maite, Ruiz-Mirazo, Eider, Holloway, Alison C., Taylor, Valerie H., McDonald, Sarah D.

Journal:

Journal of Affective Disorders

Year:

2012

Language:

english

File:

PDF, 285 KB

english, 2012

23

Viability Conditions for a Compartmentalized Protometabolic System: A Semi-Empirical Approach

Piedrafita, Gabriel, Ruiz-Mirazo, Kepa, Monnard, Pierre-Alain, Cornish-Bowden, Athel, Montero, Francisco, Fernando, Chrisantha Thomas

Journal:

Year:

2012

Language:

english

File:

PDF, 1.35 MB

english, 2012

24

Modelling autonomy: Simulating the essence of life and cognition

Xabier Barandiaran, Kepa Ruiz-Mirazo

Journal:

Year:

2008

Language:

english

File:

PDF, 158 KB

english, 2008

25

Reaction: A Plea for Hypothesis-Driven Research in Prebiotic Systems Chemistry

Ruiz-Mirazo, Kepa

Journal:

Year:

2019

Language:

english

File:

PDF, 123 KB

english, 2019

26

Fatty acids' double role in the prebiotic formation of a hydrophobic dipeptide

Murillo-Sánchez, Sara, Beaufils, Damien, González Mañas, Juan Manuel, Pascal, Robert, Ruiz-Mirazo, Kepa

Journal:

Chemical Science

Year:

2016

Language:

english

File:

PDF, 614 KB

english, 2016

27

Question 7: Modelling Minimal ‘Lipid-Peptide’ Cells

Kepa Ruiz-Mirazo, Fabio Mavelli

Journal:

Origins of Life and Evolution of Biospheres

Year:

2007

Language:

english

File:

PDF, 372 KB

english, 2007

28

Organisms and their place in biology

Kepa Ruiz-Mirazo, Arantza Etxeberria, Alvaro Moreno, Jesús Ibáñez

Journal:

Theory in Biosciences

Year:

2000

Language:

english

File:

PDF, 145 KB

english, 2000

29

Pastoral wildfires in the Mediterranean: Understanding their linkages to land cover patterns in managed landscapes

Jabier Ruiz-Mirazo, Jesús Martínez-Fernández, Cristina Vega-García

Journal:

Journal of Environmental Management

Year:

2012

Language:

english

File:

PDF, 416 KB

english, 2012

30

Model Systems of Precursor Cellular Membranes: Long-Chain Alcohols Stabilize Spontaneously Formed Oleic Acid Vesicles

Rendón, Adela, Carton, David Gil, Sot, Jesús, García-Pacios, Marcos, Montes, L.-Ruth, Valle, Mikel, Arrondo, José-Luis R., Goñi, Felix M., Ruiz-Mirazo, Kepa

Journal:

Biophysical Journal

Year:

2012

Language:

english

File:

PDF, 1.01 MB

english, 2012

31

Polyamine-RNA-membrane interactions: From the past to the future in biology

Acosta-Andrade, Carlos, Artetxe, Ibai, Lete, Marta G., Monasterio, Bingen G., Ruiz-Mirazo, Kepa, Goñi, Félix M., Sánchez-Jiménez, Francisca

Journal:

Colloids and Surfaces B: Biointerfaces

Year:

2017

Language:

english

File:

PDF, 860 KB

english, 2017

32

Permeability-driven selection in a semi-empirical protocell model: the roots of prebiotic systems evolution

Piedrafita, Gabriel, Monnard, Pierre-Alain, Mavelli, Fabio, Ruiz-Mirazo, Kepa

Journal:

Scientific Reports

Year:

2017

Language:

english

File:

PDF, 2.11 MB

english, 2017

33

Synthetic Biology: Challenging Life in Order to Grasp, Use, or Extend It

Kepa Ruiz-Mirazo, Alvaro Moreno

Journal:

Biological Theory

Year:

2013

Language:

english

File:

PDF, 311 KB

english, 2013

34

Correction: Fatty acids' double role in the prebiotic formation of a hydrophobic dipeptide

Murillo-Sánchez, Sara, Beaufils, Damien, González Mañas, Juan Manuel, Pascal, Robert, Ruiz-Mirazo, Kepa

Journal:

Chemical Science

Year:

2016

Language:

english

File:

PDF, 415 KB

english, 2016

35

Chemical roots of biological evolution: the origins of life as a process of development of autonomous functional systems

Ruiz-Mirazo, Kepa, Briones, Carlos, de la Escosura, Andrés

Journal:

Year:

2017

Language:

english

File:

PDF, 656 KB

english, 2017

36

Stochastic simulations of minimal self-reproducing cellular systems

Mavelli, F., Ruiz-Mirazo, K.

Journal:

Philosophical Transactions Biological Sciences

Year:

2007

Language:

english

File:

PDF, 298 KB

english, 2007

37

Towards the Artificial Cell || Stochastic Simulations of Minimal Self-Reproducing Cellular Systems

Fabio Mavelli and Kepa Ruiz-Mirazo

Journal:

Philosophical Transactions Biological Sciences

Year:

2007

Language:

english

File:

PDF, 1.93 MB

english, 2007

38

Emergent Chemical Behavior in Variable-Volume Protocells

Shirt-Ediss, Ben, Solé, Ricard, Ruiz-Mirazo, Kepa

Journal:

Year:

2015

Language:

english

File:

PDF, 1.89 MB

english, 2015

39

Enabling conditions for ‘open-ended evolution’

Kepa Ruiz-Mirazo, Jon Umerez, Alvaro Moreno

Journal:

Biology & Philosophy

Year:

2008

Language:

english

File:

PDF, 218 KB

english, 2008

40

Thermally-induced aggregation and fusion of protein-free lipid vesicles

Ibarguren, Maitane, Bomans, Paul H.H., Ruiz-Mirazo, Kepa, Frederik, Peter M., Alonso, Alicia, Goñi, Félix M.

Journal:

Colloids and Surfaces B: Biointerfaces

Year:

2015

Language:

english

File:

PDF, 1.61 MB

english, 2015

41

Ether- versus Ester-Linked Phospholipid Bilayers Containing either Linear or Branched Apolar Chains

Balleza, Daniel, Garcia-Arribas, Aritz B., Sot, Jesús, Ruiz-Mirazo, Kepa, Goñi, Félix M.

Journal:

Biophysical Journal

Year:

2014

Language:

english

File:

PDF, 2.25 MB

english, 2014

42

Framing major prebiotic transitions as stages of protocell development: three challenges for origins-of-life research

Shirt-Ediss, Ben, Murillo-Sánchez, Sara, Ruiz-Mirazo, Kepa

Journal:

Beilstein Journal of Organic Chemistry

Year:

2017

Language:

english

File:

PDF, 2.43 MB

english, 2017

43

The Construction of Biological âInter-Identityâ as the Outcome of a Complex Process of Protocell Development in Prebiotic Evolution

Ruiz-Mirazo, Kepa, Shirt-Ediss, Ben, Escribano-Cabeza, Miguel, Moreno, Alvaro

Journal:

Frontiers in Physiology

Year:

2020

File:

PDF, 4.96 MB

2020

44

Lysozyme Effect on Oleic Acid/Oleate Vesicles

Ruiz-Mirazo, K., Stano, P., Luisi, P. L.

Journal:

Journal of Liposome Research

Year:

2006

Language:

english

File:

PDF, 8.92 MB

english, 2006

45

Short- and medium-term response of Atriplex halimus L. to repeated seasonal grazing in south-eastern Spain

J. Ruiz-Mirazo, A.B. Robles

Journal:

Journal of Arid Environments

Year:

2011

Language:

english

File:

PDF, 514 KB

english, 2011

46

The challenging biology of transients. A view from the perspective of autonomy

Etxeberria, Arantza, Ruiz-Mirazo, Kepa

Journal:

Year:

2009

Language:

english

File:

PDF, 225 KB

english, 2009

47

Automated Animal Control: Can Discontinuous Monitoring and Aversive Stimulation Modify Cattle Grazing Behavior?

Jabier Ruiz-Mirazo, Greg J. Bishop-Hurley and Dave L. Swain

Journal:

Rangeland Ecology & Management

Year:

2011

Language:

english

File:

PDF, 1.73 MB

english, 2011

48

Automated Animal Control: Can Discontinuous Monitoring and Aversive Stimulation Modify Cattle Grazing Behavior?

Ruiz-Mirazo, Jabier., Bishop-Hurley, Greg J., Swain, Dave L.

Journal:

Rangeland Ecology & Management

Year:

2011

Language:

english

File:

PDF, 1.38 MB

english, 2011

49

Payment for Targeted Grazing: Integrating Local Shepherds into Wildfire Prevention

Varela, Elsa, Górriz-Mifsud, Elena, Ruiz-Mirazo, Jabier, López-i-Gelats, Feliu

Journal:

Year:

2018

Language:

english

File:

PDF, 1.41 MB

english, 2018

50

Correction

Rendón, Adela, Carton, David Gil, Sot, Jesús, García-Pacios, Marcos, Montes, L.-Ruth, Valle, Mikel, Arrondo, José-Luis R., Goñi, Felix M., Ruiz-Mirazo, Kepa

Journal:

Biophysical Journal

Year:

2012

Language:

english

File:

PDF, 25 KB

english, 2012

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